WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00089513 Phenotype Remark  The tails of utx-1, pis-1 double RNAi animals appear as blobs or forks, instead of the normal, smooth whip shape as in wild type animals.
Remark  (Figure 6B) utx-1, pis-1 double RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004031 pis-1 T13F2.3 Caenorhabditis elegans
WBGene00017046 utx-1 D2021.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2021.1b D2021.1b 3426   X: 8557180-8557245
CDS:D2021.1a D2021.1a 3441   X: 8557180-8557245
CDS:T13F2.3a T13F2.3a 3225   IV: 9792094-9792305
CDS:T13F2.3b T13F2.3b 3231   IV: 9792094-9792305

1 Laboratories

Primary Identifier
ZR

2 Phenotype

Identifier Name Description
WBPhenotype:0001355 gonad morphology variant Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male or female gametes compared to control (Wormatlas).
WBPhenotype:0000073 tail morphology variant Animals exhibit variations in the form, structure or composition of any portion of the most posterior region of the body compared to control. The anterior bound of the tail is not well defined though it might range from the position of the post-deirids to the opening of the anus (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041072

0 Strain