WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092546 Remark  (Figure 7) nth-1, xpa-1 double RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006963 xpa-1 K07G5.2 Caenorhabditis elegans
WBGene00011201 nth-1 R10E4.5 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07G5.2 K07G5.2 726   I: 7159725-7159795
CDS:R10E4.5a R10E4.5a 882   III: 4291684-4291812
CDS:R10E4.5b R10E4.5b 675   III: 4291684-4291812
CDS:R10E4.5c R10E4.5c 423   III: 4291684-4291812
CDS:R10E4.5d R10E4.5d 897   III: 4291684-4291812

0 Laboratories

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000306 transgene expression variant Any variation in the characteristic expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to control animals.
WBPhenotype:0000068 cellular oxidative stress response variant Any variation in the state or activity of a cell (in terms of secretion, enzyme production, gene expression, etc.) in response to high levels of reactive oxygen species, compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036135

1 Strain

WormBase ID
WBStrain00005102