WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065092 Genotype  glp-4(bn2);rrf-3(pk1426)
Remark  To avoid confounding effects of progeny in killing assays, used sterile strain glp-4(bn2);rrf-3(pk1426), which lacks the germline altogether (glp-4) and is more sensitive to RNAi (rrf-3). Pseudomonas aeruginosa strain used was the clinical isolate PA14.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001886 his-12 ZK131.6 Caenorhabditis elegans
WBGene00001890 his-16 ZK131.10 Caenorhabditis elegans
WBGene00001917 his-43 F08G2.2 Caenorhabditis elegans
WBGene00013934 ZK131.11 ZK131.11 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK131.6 ZK131.6 384   II: 13821198-13821581
CDS:F08G2.2 F08G2.2 384   II: 13827326-13827709
CDS:ZK131.10 ZK131.10 384   II: 13817760-13818143

1 Laboratories

Primary Identifier
WE

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028482

0 Strain