WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00002107 Phenotype Remark  %penetrance
Remark  yk375a11 Secondary Identifier  SA:yk375a11

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016905 ztf-3 C53D5.4 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D5.4b C53D5.4b 906   I: 286352-286420
CDS:C53D5.4c C53D5.4c 867   I: 286352-286420
CDS:C53D5.4a C53D5.4a 1011   I: 286371-286420
CDS:C53D5.4d C53D5.4d 972   I: 286371-286420
CDS:C53D5.4e C53D5.4e 561   I: 286371-286420
CDS:C53D5.4f C53D5.4f 456   I: 286352-286420

2 Laboratories

Primary Identifier
SA
YK

3 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0000229 small Animals are shorter and thinner than control animals at the same developmental stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain