WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00002698 Remark  Phenotype comment -- Confirmed with independent dsRNA (Y43F4B.6-RNA2; similar -albeit seemingly weaker- phenotype).
Secondary Identifier  TH:338a7

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002229 klp-19 Y43F4B.6 Caenorhabditis elegans
WBGene00012803 pgm-2 Y43F4B.5 Caenorhabditis elegans
WBGene00045072 Y43F4B.11 Y43F4B.11 Caenorhabditis elegans
WBGene00045113 Y43F4B.12 Y43F4B.12 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F4B.5b Y43F4B.5b 1380   III: 13299379-13299538
CDS:Y43F4B.6 Y43F4B.6 3252   III: 13303021-13303276
CDS:Y43F4B.5a Y43F4B.5a 1788   III: 13299379-13299538

1 Laboratories

Primary Identifier
TH

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004403

0 Strain