WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00036881 Phenotype Remark  penetrance is less than 90%
Remark  bacterial-feeding RNAi began at the L1 larval stage Secondary Identifier  MV_SV:mv_Y39A1A.15c

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.15f Y39A1A.15f 2229   III: 10669271-10669340
CDS:Y39A1A.15g Y39A1A.15g 2001   III: 10673006-10673440
CDS:Y39A1A.15a Y39A1A.15a 3324   III: 10663661-10664312
CDS:Y39A1A.15b Y39A1A.15b 2856   III: 10655779-10655880
CDS:Y39A1A.15c Y39A1A.15c 2712   III: 10666960-10667058
CDS:Y39A1A.15e Y39A1A.15e 2622   III: 10664524-10664532

2 Laboratories

Primary Identifier
MV
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain