WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00022785 Phenotype Remark  csb-1 RNAi results in an increased sensitivity to UV irradiation as judged by the hatching efficiency of F2 embryos
Remark  Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match. Secondary Identifier  [cgc5346]:csb-1

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000803 csb-1 F53H4.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H4.1 F53H4.1 2874   X: 15861695-15862036

1 Laboratories

Primary Identifier
NB

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000101 UV induced apoptosis increased Animals exhibit an increase in the extent of activation of programmed cell death by exposure to the nucleic acid damaging agent, UV irradiation, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005346

1 Strain

WormBase ID
WBStrain00000001