WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00025128 Genotype  NL4256 rrf-3(pk1426)
Phenotype Remark  %lethal range Secondary Identifier  Simmer:F17E9.13

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001904 his-30 F35H10.1 Caenorhabditis elegans
WBGene00001907 his-33 F17E9.13 Caenorhabditis elegans
WBGene00001921 his-47 B0035.7 Caenorhabditis elegans
WBGene00001931 his-57 F54E12.5 Caenorhabditis elegans
WBGene00001939 his-65 H02I12.7 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0035.7 B0035.7 384   IV: 11324056-11324439
CDS:F54E12.5b F54E12.5b 444   IV: 11340412-11340791
CDS:F54E12.5c F54E12.5c 411   IV: 11340412-11340791
CDS:F17E9.13 F17E9.13 384   IV: 8335335-8335718
CDS:F35H10.1 F35H10.1 384   IV: 8331666-8332049
CDS:F54E12.5a F54E12.5a 384   IV: 11340412-11340795
CDS:H02I12.7 H02I12.7 384   IV: 11401092-11401475

1 Laboratories

Primary Identifier
NL

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain