WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110357 Phenotype Remark  "RNAi inhibition of either elo-5 or acs-1 from the time of hatching causes early larval arrest and lethality, which can be rescued by including C17ISO in the diet (Kniazeva et al. 2004, 2008). We found that with C17ISO supplementation, elo-5(RNAi) animals proliferated indefinitely, while acs-1(RNAi) animals grew as wild type for only one generation and produced only dead embryos (Emb phenotype) (Fig. 1B,C)."
Remark  (Fig. 1B,C) acs-1(RNAi)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018488 acs-1 F46E10.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46E10.1c F46E10.1c 1737   V: 6529269-6529439
CDS:F46E10.1a F46E10.1a 1872   V: 6525095-6525136
CDS:F46E10.1b F46E10.1b 1794   V: 6527511-6527520

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040893

0 Strain