WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00026532 Genotype  NL4256 rrf-3(pk1426)
Phenotype Remark  %lethal range Secondary Identifier  Simmer:W09H1.2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001919 his-45 B0035.10 Caenorhabditis elegans
WBGene00001929 his-55 F54E12.1 Caenorhabditis elegans
WBGene00001933 his-59 F55G1.2 Caenorhabditis elegans
WBGene00001937 his-63 F22B3.2 Caenorhabditis elegans
WBGene00001947 his-73 W09H1.2 Caenorhabditis elegans
WBGene00012374 W09H1.4 W09H1.4 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09H1.2 W09H1.2 141   II: 13183705-13183845
CDS:B0035.10 B0035.10 411   IV: 11326588-11326998
CDS:F22B3.2 F22B3.2 411   IV: 11406451-11406861
CDS:F54E12.1 F54E12.1 411   IV: 11337853-11338263
CDS:F55G1.2 F55G1.2 411   IV: 7488249-7488659

1 Laboratories

Primary Identifier
NL

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain