WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064066 Genotype  mel-26(ct61sb4)
Phenotype Remark  reduced cortical ruffling Remark  Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000838 cul-3 Y108G3AL.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108G3AL.1b Y108G3AL.1b 2154   V: 178593-179386
CDS:Y108G3AL.1c Y108G3AL.1c 723   V: 181483-181861
CDS:Y108G3AL.1d Y108G3AL.1d 342   V: 183691-183900
CDS:Y108G3AL.1a Y108G3AL.1a 2334   V: 177644-177700

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001044 cortical dynamics defective early emb Little/no cortical ruffling or pseudocleavage furrow, or excessive cortical activity. In C. elegans, this is often characterized at the two-cell stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026821

0 Strain