WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00075580

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004028 pif-1 Y18H1A.6 Caenorhabditis elegans
WBGene00004913 snn-1 Y38C1BA.2 Caenorhabditis elegans
WBGene00006604 tra-1 Y47D3A.6 Caenorhabditis elegans
WBGene00044434 Y18H1A.15 Y18H1A.15 Caenorhabditis elegans
WBGene00021835 Y54E10A.17 Y54E10A.17 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.6a Y18H1A.6a 2034   I: 720078-720253
CDS:Y18H1A.6d Y18H1A.6d 243   I: 730392-730532
CDS:Y18H1A.6b Y18H1A.6b 1185   I: 722316-722355
CDS:Y18H1A.6c Y18H1A.6c 1716   I: 720493-720599

0 Laboratories

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031057

1 Strain

WormBase ID
WBStrain00000001