WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097952 Genotype  sma-2(e502)
Remark  (Figure 6A, S6A) cfp-1/F52B11.1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009924 cfp-1 F52B11.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B11.1d F52B11.1d 1323   IV: 14078721-14078969
CDS:F52B11.1c F52B11.1c 966   IV: 14080257-14080499
CDS:F52B11.1f F52B11.1f 297   IV: 14082080-14082170
CDS:F52B11.1a F52B11.1a 1527   IV: 14077450-14077618
CDS:F52B11.1b F52B11.1b 1170   IV: 14077523-14077618
CDS:F52B11.1e F52B11.1e 597   IV: 14081555-14081739

1 Laboratories

Primary Identifier
CQ

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037682

0 Strain