WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087019 Genotype  eri-1(mg366)
Phenotype Remark  Adult worms exhibited breaks in their alae Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021921 rbm-39 Y55F3AM.3 Caenorhabditis elegans
WBGene00021922 atg-3 Y55F3AM.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.3a Y55F3AM.3a 1743   IV: 1012788-1012850
CDS:Y55F3AM.4a Y55F3AM.4a 918   IV: 1010512-1010802
CDS:Y55F3AM.4b Y55F3AM.4b 291   IV: 1012141-1012431

1 Laboratories

Primary Identifier
GR

2 Phenotype

Identifier Name Description
WBPhenotype:0000280 breaks in alae The small linear ridges running along the lateral lines of the cuticle, lengthwise along the body, contain gaps as opposed to a continuous arrangement (Wormatlas).
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031224

0 Strain