WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087168 Genotype  lin-1(e1777)
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.. Figure 1 names the targeted sequence as F56B3.4 and the locus as skr-18 (which has sequence name F56B3.12 as of WS227); used skr-18/F56B3.12 for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004824 F56B3.4 F56B3.4 Caenorhabditis elegans
WBGene00018935 skr-18 F56B3.12 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B3.4b F56B3.4b 1563   IV: 786455-786479
CDS:F56B3.4a F56B3.4a 1899   IV: 786324-786479
CDS:F56B3.12 F56B3.12 552   IV: 794752-795259

1 Laboratories

Primary Identifier
GR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031224

0 Strain