WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102730 Genotype  srh-142::tph-1(RNAi)
Phenotype Remark  Selective knockdown of tph-1 in ADF significantly reduced pumping. Remark  Selective knockdown of tph-1 in ADF. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006600 tph-1 ZK1290.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1290.2a ZK1290.2a 1599   II: 7549358-7549443
CDS:ZK1290.2b ZK1290.2b 1290   II: 7550081-7550309

1 Laboratories

Primary Identifier
KQ

1 Phenotype

Identifier Name Description
WBPhenotype:0000019 pharyngeal pumping reduced Pharyngeal pumping motion occurs at a slower rate than control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041278

0 Strain