WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110873 Genotype  frIs7[Pnlp-29::GFP]
Phenotype Remark  RNAi resulted in a reduction in expression of the anitmicrobial peptide gene nlp-29 in worms after infection by Drechmeria coniospora, as indicated by reduced expression of a Pnlp-29::GFP transgene, compared to controls Remark  Table S5, sheet "final 297 clones", column "Is clone/overlaps clone"
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003787 npp-1 K07F5.13 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07F5.13b K07F5.13b 1650   IV: 9858492-9858589
CDS:K07F5.13a K07F5.13a 1839   IV: 9859372-9859867
CDS:K07F5.13c K07F5.13c 1920   IV: 9858492-9858589

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002460 no induction of antimicrobial peptide expression after infection Animals exhibit no induction of expression of an antimicrobial peptide after an infection, unlike control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049531

0 Strain