WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00113166 Genotype  cIs13[Phsp-6::GFP] V
Phenotype Remark  Table S3, Strong reduction of transgene reporter expression Remark  ZC376.7 (atfs-1) RNAi. RNAi clone sequence and identity not specified. RNAi construct provided by Dr. Cole Haynes (Memorial Sloan Kettering Center). Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013878 atfs-1 ZC376.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC376.7b ZC376.7b 1419   V: 14194483-14194578
CDS:ZC376.7d ZC376.7d 846   V: 14196345-14196419
CDS:ZC376.7a ZC376.7a 1467   V: 14194483-14194578
CDS:ZC376.7c ZC376.7c 1425   V: 14194483-14194578

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049830

1 Strain

WormBase ID
WBStrain00034068