WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00075654 Phenotype Remark  RNAi treatment did not reduce the extent of distal tip cell (DTC) migration in vab-3(e1796)animals. In vab-3(e1796) the DTC does not stop migration, authors call this perpetual DTC migration.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000424 ced-10 C09G12.8 Caenorhabditis elegans
WBGene00004287 rac-2 K03D3.10 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G12.8a C09G12.8a 390   IV: 3507379-3507571
CDS:C09G12.8b C09G12.8b 576   IV: 3507379-3507571
CDS:K03D3.10 K03D3.10 588   IV: 16308225-16308329

1 Laboratories

Primary Identifier
JE

1 Phenotype

Identifier Name Description
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030828

1 Strain

WormBase ID
WBStrain00004472