WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084172 Genotype  qIs57
Phenotype Remark  Gonad arms did not fully elongate Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006379 sys-1 T23D8.9 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.9a T23D8.9a 2436   I: 9980494-9980576
CDS:T23D8.9b T23D8.9b 720   I: 9982656-9982683
CDS:T23D8.9c T23D8.9c 2037   I: 9980494-9980576

1 Laboratories

Primary Identifier
JK

2 Phenotype

Identifier Name Description
WBPhenotype:0001656 distal tip cell development variant Any variation in the progression of the leader cell that guides and shapes the outgrowth of the gonad while crawling along the body wall to force the germline to extend into a long tubular shape over time from its formation to its mature structure compared to control.
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001280 transgene expression reduced hermaphrodite Any decrease in the intensity of expression of a gene product produced by exogenous DNA, exclusively in the hermaphrodite, that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00033102

0 Strain