WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00100071 Genotype  rrf-3(pk1426); him-8(e1489)
Phenotype Remark  RNAi resulted in hermaphrodites with gonad arms that were not fully elongated Remark  (Table S2) epi-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3a K08C7.3a 11115   IV: 10666833-10667028
CDS:K08C7.3d K08C7.3d 10992   IV: 10666833-10667028
CDS:K08C7.3e K08C7.3e 11088   IV: 10666833-10667028
CDS:K08C7.3b K08C7.3b 11019   IV: 10666833-10667028
CDS:K08C7.3c K08C7.3c 11052   IV: 10666833-10667028
CDS:K08C7.3f K08C7.3f 11148   IV: 10666833-10667028

1 Laboratories

Primary Identifier
DZ

1 Phenotype

Identifier Name Description
WBPhenotype:0000188 gonad arm morphology variant Any variation in the 'arm-like' form, structure or composition of the specialized tissue of the reproductive tract that produces gametes compared to control. In C. elegans the reproductive tract in the hermaphrodite has two equivalent gonad 'arms', while the male has a one-armed gonad.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain