WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097411 Genotype  ced-1::GFP
Phenotype Remark  ifg-1 RNAi (construct N2) resulted in a significant increase in the number of germ cell corpses. Cells undergoing apoptosis displayed altered nuclear morphology. Remark  (Figure 5a) ifg-1 RNAi (construct N2)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002066 ifg-1 M110.4 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.4b M110.4b 3468   II: 8217254-8217302
CDS:M110.4d M110.4d 3480   II: 8217254-8217302
CDS:M110.4e M110.4e 3483   II: 8217254-8217302
CDS:M110.4a M110.4a 3471   II: 8217254-8217302
CDS:M110.4c M110.4c 3129   II: 8217839-8218837

1 Laboratories

Primary Identifier
KX

3 Phenotype

Identifier Name Description
WBPhenotype:0000183 apoptosis increased Any perturbation that causes an elevation in the frequency of cell death by apoptosis compared to control animals.
WBPhenotype:0001180 accumulated germline cell corpses Animals exhibit an increase in the quantity of germ line cells that have undergone programmed cell death but have not been engulfed.
WBPhenotype:0001028 nuclear appearance variant The morphological appearance of nuclei differs from control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031847

0 Strain