WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098112 Remark  (Figure 2a) cul-3 RNAi. Exact sequence used for RNAi not stated by authors, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000838 cul-3 Y108G3AL.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108G3AL.1b Y108G3AL.1b 2154   V: 178593-179386
CDS:Y108G3AL.1c Y108G3AL.1c 723   V: 181483-181861
CDS:Y108G3AL.1d Y108G3AL.1d 342   V: 183691-183900
CDS:Y108G3AL.1a Y108G3AL.1a 2334   V: 177644-177700

1 Laboratories

Primary Identifier
WD

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000183 apoptosis increased Any perturbation that causes an elevation in the frequency of cell death by apoptosis compared to control animals.
WBPhenotype:0001180 accumulated germline cell corpses Animals exhibit an increase in the quantity of germ line cells that have undergone programmed cell death but have not been engulfed.
WBPhenotype:0001918 chemical hypersensitive Animals respond to a specific chemical at a lower concentration or a shorter exposure compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031605

1 Strain

WormBase ID
WBStrain00000001