WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00059915 Phenotype Remark  The strong precocious phenotype of lin-42(n1089) lf animals (91% of animals showed precocious seam cell fusion) was further enhanced by kin-20 RNAi (100% of animals showed precocious fusion).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002203 kin-20 F46F2.2 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F2.2a F46F2.2a 1440   X: 15270733-15270748
CDS:F46F2.2e F46F2.2e 894   X: 15270733-15270748
CDS:F46F2.2d F46F2.2d 1443   X: 15271105-15271123
CDS:F46F2.2f F46F2.2f 897   X: 15271105-15271123
CDS:F46F2.2b F46F2.2b 948   X: 15269657-15269726
CDS:F46F2.2c F46F2.2c 1494   X: 15269657-15269726
CDS:F46F2.2g F46F2.2g 930   X: 15271105-15271123

1 Laboratories

Primary Identifier
CT

1 Phenotype

Identifier Name Description
WBPhenotype:0000166 seam cell fusion variant Variations in the ability of seam cells to fuse to form a continuous syncytium along the body wall late larval development, (separate from the hyp 7 syncytium), compared to control (WormAtlas). Hypodermal seam cells lie along the lateral body wall to form longitudinal stripes of epithelial cells underlying the alae, and are required for alae formation.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024931

1 Strain

WormBase ID
WBStrain00026956