WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077983 Phenotype Remark  In an elt-5(RNAi) embryo at the ~2.5- fold stage, one of the seam cells, V1, does not show adherens junctions, indicating that it has fused with the neighboring hyp7 syncytium on the dorsal and ventral sides. In addition, in an embryo slightly past the comma stage V1 is ventrally misplaced, and its neighbors, H2 and V2, inappropriately contact each other.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A8.1a F55A8.1a 1131   IV: 1913472-1913597
CDS:F55A8.1b F55A8.1b 1140   IV: 1913472-1913597

1 Laboratories

Primary Identifier
JR

1 Phenotype

Identifier Name Description
WBPhenotype:0000166 seam cell fusion variant Variations in the ability of seam cells to fuse to form a continuous syncytium along the body wall late larval development, (separate from the hyp 7 syncytium), compared to control (WormAtlas). Hypodermal seam cells lie along the lateral body wall to form longitudinal stripes of epithelial cells underlying the alae, and are required for alae formation.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004833

0 Strain