WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00100505 Genotype  rrf-3(pk1426); him-8(e1489)
Phenotype Remark  RNAi results in animals that lay dead eggs and exhibit a severely reduced brood size Remark  (Table S2) Y53F4B.13 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013160 cmtr-1 Y53F4B.13 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.13a Y53F4B.13a 2757   II: 15026196-15026204
CDS:Y53F4B.13d Y53F4B.13d 1785   II: 15026196-15026204
CDS:Y53F4B.13b Y53F4B.13b 2694   II: 15026196-15026204
CDS:Y53F4B.13c Y53F4B.13c 1848   II: 15026196-15026204

1 Laboratories

Primary Identifier
DZ

2 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000274 dead eggs laid Animals lay eggs that are inviable.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain