WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087552 Phenotype Remark  sqv-5 RNAi-treated L4 larvae had reduced vulval extracellular spaces reminiscent of mutants homozygous for a weak loss-of-function mutation in other sqv genes. The sqv-5 RNAi-treated adults treated were reduced in brood size (29+/-23, n=47) as compared with vector RNA-treated adults (264+/-33, n=31).
Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005023 sqv-5 T24D1.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24D1.1b T24D1.1b 2205   I: 9948203-9948211
CDS:T24D1.1a T24D1.1a 2181   I: 9949108-9949769
CDS:T24D1.1c T24D1.1c 2211   I: 9948203-9948211

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005867

1 Strain

WormBase ID
WBStrain00000001