WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00063869 Phenotype Remark  time between posterior contractions increased and was arrhythmic

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans

25 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4b B0348.4b 4296   V: 21007-21090
CDS:B0348.4f B0348.4f 4221   V: 21007-21090
CDS:B0348.4h B0348.4h 3978   V: 21007-21090
CDS:B0348.4j B0348.4j 4041   V: 21007-21090
CDS:B0348.4k B0348.4k 4005   V: 21007-21090
CDS:B0348.4m B0348.4m 3762   V: 21007-21090
CDS:B0348.4n B0348.4n 4455   V: 21007-21090
CDS:B0348.4u B0348.4u 3858   V: 21007-21090
CDS:B0348.4v B0348.4v 3957   V: 21007-21090
CDS:B0348.4r B0348.4r 4137   V: 21007-21090
CDS:B0348.4t B0348.4t 3894   V: 21007-21090
CDS:B0348.4x B0348.4x 3714   V: 21007-21090
CDS:B0348.4e B0348.4e 4503   V: 21007-21090
CDS:B0348.4d B0348.4d 4539   V: 21007-21090
CDS:B0348.4a B0348.4a 4260   V: 21007-21090
CDS:B0348.4c B0348.4c 1779   V: 21007-21090
CDS:B0348.4g B0348.4g 4185   V: 21007-21090
CDS:B0348.4i B0348.4i 3942   V: 21007-21090
CDS:B0348.4l B0348.4l 3798   V: 21007-21090
CDS:B0348.4o B0348.4o 4419   V: 21007-21090
CDS:B0348.4p B0348.4p 4212   V: 21007-21090
CDS:B0348.4q B0348.4q 4176   V: 21007-21090
CDS:B0348.4s B0348.4s 4101   V: 21007-21090
CDS:B0348.4w B0348.4w 3921   V: 21007-21090
CDS:B0348.4y B0348.4y 3678   V: 21007-21090

1 Laboratories

Primary Identifier
VP

1 Phenotype

Identifier Name Description
WBPhenotype:0000157 posterior body wall contraction defecation cycle variant Animals exhibit variations in the sustained posterior body muscle contractions that precede the remaining contractions of the defecation cycle compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026831

0 Strain