WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00063877 Genotype  rde-1(ne219); nhx-2::RDE-1
Phenotype Remark  posterior body wall muscle contractions in these animals are still highly arrhythmic Remark  The nhx-2 promoter was used to drive RDE-1 expression selectively in the gut. rde-1 mutants are resistant to RNAi.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2a F33D4.2a 8679   IV: 7675174-7675252
CDS:F33D4.2d F33D4.2d 8511   IV: 7677568-7677581
CDS:F33D4.2g F33D4.2g 5142   IV: 7681425-7681468
CDS:F33D4.2e F33D4.2e 8574   IV: 7681425-7681468
CDS:F33D4.2f F33D4.2f 8541   IV: 7681425-7681468
CDS:F33D4.2h F33D4.2h 8604   IV: 7681425-7681468

1 Laboratories

Primary Identifier
VP

1 Phenotype

Identifier Name Description
WBPhenotype:0000157 posterior body wall contraction defecation cycle variant Animals exhibit variations in the sustained posterior body muscle contractions that precede the remaining contractions of the defecation cycle compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026831

0 Strain