WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00111072 Genotype  tpst-1p ::unc-31(RNAi); sid-1(pk3321)
Remark  The tpst-1 promoter used to drive sense and antisense unc-31 is AIY-specific.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006767 unc-31 ZK897.1 Caenorhabditis elegans

18 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK897.1a ZK897.1a 4062   IV: 12773886-12773945
CDS:ZK897.1b ZK897.1b 4026   IV: 12773886-12773945
CDS:ZK897.1h ZK897.1h 4101   IV: 12773886-12773945
CDS:ZK897.1j ZK897.1j 4206   IV: 12773886-12773945
CDS:ZK897.1k ZK897.1k 4194   IV: 12773886-12773945
CDS:ZK897.1l ZK897.1l 4185   IV: 12773886-12773945
CDS:ZK897.1m ZK897.1m 4173   IV: 12773886-12773945
CDS:ZK897.1o ZK897.1o 4137   IV: 12773886-12773945
CDS:ZK897.1p ZK897.1p 4170   IV: 12773886-12773945
CDS:ZK897.1q ZK897.1q 4149   IV: 12773886-12773945
CDS:ZK897.1c ZK897.1c 4137   IV: 12773886-12773945
CDS:ZK897.1e ZK897.1e 2793   IV: 12780966-12780971
CDS:ZK897.1g ZK897.1g 333   IV: 12786660-12786864
CDS:ZK897.1d ZK897.1d 2682   IV: 12780966-12780971
CDS:ZK897.1i ZK897.1i 4158   IV: 12773886-12773945
CDS:ZK897.1n ZK897.1n 4149   IV: 12773886-12773945
CDS:ZK897.1r ZK897.1r 4113   IV: 12773886-12773945
CDS:ZK897.1s ZK897.1s 2805   IV: 12780966-12780971

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000147 organism starvation response variant Any variation in the state or activity of an organism as a result of deprivation of nourishment, compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00052914

0 Strain