WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078265 Genotype  ain-1(ku322)
Phenotype Remark  The translational repression of miRNA target mRNAs is relieved and degradation of miRNA target mRNAs is reduced.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015007 ain-2 B0041.2 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0041.2b B0041.2b 2241   I: 4653527-4653542
CDS:B0041.2e B0041.2e 2187   I: 4653527-4653542
CDS:B0041.2f B0041.2f 2181   I: 4653527-4653542
CDS:B0041.2c B0041.2c 2115   I: 4655370-4655496
CDS:B0041.2g B0041.2g 2061   I: 4655370-4655496
CDS:B0041.2a B0041.2a 2121   I: 4655370-4655496
CDS:B0041.2d B0041.2d 2247   I: 4653527-4653542

1 Laboratories

Primary Identifier
HW

2 Phenotype

Identifier Name Description
WBPhenotype:0000136 mRNA levels increased Animals exhibit elevated levels of messenger RNA compared to control.
WBPhenotype:0000202 alae variant Any variation in the small linear ridges running along the lateral lines of the cuticle, lengthwise along the body compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032489

0 Strain