WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00090542 Phenotype Remark  skn-1(RNAi) resulted in increased levels of endogenous mRNA for genes W07A12.7 (rhy-1), F37B1.8 (gst-19), and K10H10.2 (cysl-2) (as determined by RT-PCR) after 1 hour exposure to 50 ppm hydrogen sulfide gas (H2S), compared to control.
Remark  (Figure 3A) skn-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2d T19E7.2d 672   IV: 5651764-5651840
CDS:T19E7.2c T19E7.2c 1602   IV: 5651764-5651840
CDS:T19E7.2a T19E7.2a 1872   IV: 5651764-5651840
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840

1 Laboratories

Primary Identifier
AR

2 Phenotype

Identifier Name Description
WBPhenotype:0000137 mRNA levels reduced Animals exhibit decreased levels of messenger RNA compared to control.
WBPhenotype:0000136 mRNA levels increased Animals exhibit elevated levels of messenger RNA compared to control.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000114 mRNA expression variant Variations in the biogenesis and stability of messenger RNA molecules compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040285

1 Strain

WormBase ID
WBStrain00000001