WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084580 Phenotype Remark  zip-2 RNAi suppresses the increase in mRNA levels induced by P.aeruginosa infection (See paper for genes in Table S3)
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019327 zip-2 K02F3.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02F3.4 K02F3.4 927   III: 834460-834468

1 Laboratories

Primary Identifier
ERT

2 Phenotype

Identifier Name Description
WBPhenotype:0000137 mRNA levels reduced Animals exhibit decreased levels of messenger RNA compared to control.
WBPhenotype:0001857 pathogen induced gene expression variant Gene expression of an animal is not influenced by the exposure to disease causing agents in the same manner as control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035891

0 Strain