WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103107 Genotype  daf-2(e1370); aak-1(tm1944); aak-2(ok524); ctl-3(ok2042)
Phenotype Remark  hif-1(RNAi) reversed the increased gene expression level of enzymes (fat-2, fat-3, fat-5, fat-6, fat-7, elo-5, and elo-6) involved in de novo fatty-acid synthesis in aak(0);ctl-3 mutant dauer larvae. Remark  (Figure 5F) hif-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001851 hif-1 F38A6.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.3a F38A6.3a 2160   V: 20780502-20780521
CDS:F38A6.3b F38A6.3b 2166   V: 20780502-20780521
CDS:F38A6.3e F38A6.3e 2136   V: 20781319-20781505
CDS:F38A6.3c F38A6.3c 1512   V: 20782536-20782568
CDS:F38A6.3d F38A6.3d 1998   V: 20780502-20780521
CDS:F38A6.3f F38A6.3f 2142   V: 20781319-20781505

1 Laboratories

Primary Identifier
MR

1 Phenotype

Identifier Name Description
WBPhenotype:0000137 mRNA levels reduced Animals exhibit decreased levels of messenger RNA compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041478

0 Strain