WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110595 Genotype  HRG-3-mCherry
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. Authors used HRG-3-mCherry to identify components that regulate HRG-3 secretion from the intestine.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2a F33D4.2a 8679   IV: 7675174-7675252
CDS:F33D4.2d F33D4.2d 8511   IV: 7677568-7677581
CDS:F33D4.2g F33D4.2g 5142   IV: 7681425-7681468
CDS:F33D4.2e F33D4.2e 8574   IV: 7681425-7681468
CDS:F33D4.2f F33D4.2f 8541   IV: 7681425-7681468
CDS:F33D4.2h F33D4.2h 8604   IV: 7681425-7681468

0 Laboratories

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000112 protein expression variant Variations in the biogenesis and stability of protein molecules compared to control.
WBPhenotype:0001864 protein transport variant Any variation in the processes that modulate the frequency, rate or extent of the directed movement of a protein into, out of, within or between cells by means of some external agent such as a transporter or pore compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038456

0 Strain