WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101854 Phenotype Remark  Phasmid dye filling was used as an indicator of normal T cell polarity (T cell polarity was defective).
Remark  Exact sequence used for RNAi not stated by authors, Vidal laboratory clone used for curation. To bypass the RNAi maternal lethal effects a zygotic RNAi scheme was used.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006943 wrm-1 B0336.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0336.1a B0336.1a 2391   III: 5722883-5722907
CDS:B0336.1b B0336.1b 2229   III: 5723639-5723782

1 Laboratories

Primary Identifier
KS

2 Phenotype

Identifier Name Description
WBPhenotype:0002211 phasmid neuron dye filling defect Animals exhibit defects in dye-filling of the neuronal cells of the phasmid sensilla. In C. elegans, these neurons are commonly assayed by dye-filling with FITC, DiI or DiO.
WBPhenotype:0000104 cell polarity variant Contents or structures of a cell are no longer restricted/localized to their typical positions within the cell.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027345

0 Strain