WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092012 Genotype  rrf-3(pk1426); daf-2(m577); wuIs177 (Pftn-1::GFP)
Phenotype Remark  RNAi resulted in decreased expression of the Pftn-1::GFP transgene Remark  (Table S1) nhr-66 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003656 nhr-66 T09A12.4 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A12.4c T09A12.4c 2202   IV: 8226743-8226979
CDS:T09A12.4f T09A12.4f 2196   IV: 8226743-8226979
CDS:T09A12.4e T09A12.4e 1560   IV: 8226743-8226979
CDS:T09A12.4i T09A12.4i 1554   IV: 8226743-8226979
CDS:T09A12.4a T09A12.4a 1734   IV: 8226743-8226979
CDS:T09A12.4b T09A12.4b 1581   IV: 8226743-8226979
CDS:T09A12.4d T09A12.4d 1980   IV: 8226743-8226979
CDS:T09A12.4g T09A12.4g 1974   IV: 8226743-8226979
CDS:T09A12.4h T09A12.4h 1740   IV: 8226743-8226979
CDS:T09A12.4j T09A12.4j 1587   IV: 8226743-8226979

1 Laboratories

Primary Identifier
GA

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040863

0 Strain