WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092658 Genotype  clk-1(qm30)
Remark  (Table 1) cyp-33C4 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018261 cyp-33C5 F41B5.3 Caenorhabditis elegans
WBGene00018262 cyp-33C3 F41B5.4 Caenorhabditis elegans
WBGene00018413 cyp-33C4 F44C8.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44C8.1 F44C8.1 1482   V: 2236179-2236377
CDS:F41B5.4 F41B5.4 1503   V: 2242976-2243174
CDS:F41B5.3b F41B5.3b 1167   V: 2245662-2246041
CDS:F41B5.3a F41B5.3a 1485   V: 2245028-2245226

1 Laboratories

Primary Identifier
MQ

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000246 defecation cycle variable length Animals exhibit variation in the time of onset of the defecation motor program significantly greater than that observed for control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040902

0 Strain