WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00069914 Genotype  LIN12(+)::GFP
Phenotype Remark  LIN12::GFP is internalized, but not downregulated in P6.px cells. In control animals, LIN12::GFP is downregulated in P6.px of the primary vulval linage.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007010 alx-1 R10E12.1 Caenorhabditis elegans
WBGene00219612 linc-153 T27F2.8 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E12.1b R10E12.1b 2649   III: 9957358-9957572
CDS:R10E12.1c R10E12.1c 2541   III: 9957358-9957572
CDS:R10E12.1a R10E12.1a 2586   III: 9957358-9957572
CDS:R10E12.1d R10E12.1d 1497   III: 9957358-9957572

1 Laboratories

Primary Identifier
GS

2 Phenotype

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.
WBPhenotype:0001400 level of protein expression variant Animals exhibit variations in the measured expression of a protein compared to that observed in control animals.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000220 vulva cell fate specification variant Any aberrancy in the processes that govern acquisition of vulval cell fates compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026869

0 Strain