WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00111047 Phenotype Remark  mfap-1(RNAi) increased tos-1 intron 1 retention and exon 3 skipping, suggesting that the recognition of the splice sites in ntron 1 or before exon 3 was reduced.mfap-1(RNAi) did not cause recognition of the cryptic splice site in tos-1 intron 1, suggesting that MFAP probably is not essential for determining the specificity of splice sites.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009671 mfap-1 F43G9.10 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43G9.10 F43G9.10 1401   I: 8638598-8638777

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001807 alternative splicing variant Any variation in the process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041328

0 Strain