WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101772 Genotype  GFP::H2B::mom-2(3'UTR)
Phenotype Remark  spn-4 RNAi resulted in gfp::h2b::mom-2(3'UTR) mRNAs being uniformaly distributed in embryos beyond the 4-cell stage, likely the result of defective degradation of these mRNAs in somatic blastomeres. Remark  (Figure 5B) spn-4 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004984 spn-4 ZC404.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC404.8 ZC404.8 1056   V: 6783653-6783774

1 Laboratories

Primary Identifier
TX

2 Phenotype

Identifier Name Description
WBPhenotype:0001826 RNA degradation variant Variations in the regulated breakdown of RNA species via the action of cellular enzymes (RNases) compared to control.
WBPhenotype:0001915 mRNA expression ectopic Any variation that results in the cellular expression of an mRNA in cells/tissues, that is otherwise not observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044315

0 Strain