WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097528 Genotype  ced-5(n1812); opIs117[Phsp::sel-1sp::GFP::AnxV] (opIs117 is a marker for phospholipid bilayer outer leaflet phosphatidylserine (PS) exposure, an indicator of apoptosis)
Phenotype Remark  RNAi results in a decrease in the number of apoptotic germ cell corpses, as determined by Nomarski/DIC optics (for germ cell corpses) and GFP epifluorescence (for phosphatidylserine exposure labeled by GFP::AnxV) Remark  (Figure 3B, S2A) ced-3 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000417 ced-3 C48D1.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D1.2a C48D1.2a 1512   IV: 13199230-13199292
CDS:C48D1.2b C48D1.2b 864   IV: 13199230-13199292

1 Laboratories

Primary Identifier
WS

1 Phenotype

Identifier Name Description
WBPhenotype:0002045 cell corpse number decreased Animals exhibit fewer cell corpses compared to controls at the same developmental life stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030738

0 Strain