WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065111 Genotype  glp-4(bn2);rrf-3(pk1426)
Remark  To avoid confounding effects of progeny in killing assays, used sterile strain glp-4(bn2);rrf-3(pk1426), which lacks the germline altogether (glp-4) and is more sensitive to RNAi (rrf-3). Pseudomonas aeruginosa strain used was the clinical isolate PA14.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002054 ifb-2 F10C1.7 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10C1.7a F10C1.7a 1632   II: 5750200-5750263
CDS:F10C1.7c F10C1.7c 1581   II: 5750200-5750263
CDS:F10C1.7e F10C1.7e 1734   II: 5750200-5750263

1 Laboratories

Primary Identifier
WE

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028482

0 Strain