WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00095166 Phenotype Remark  Sensitivity to P. aeruginosa-mediated killing. NR222 strain, which restricts RNAi to the epidermis, had no effect on pathogen sensitivity.
Remark  Animals fed with dsRNA corresponding to the gene of interest for two successive generations. The VP303 rde-1(ne219); [nhx-2:rde-1, rol-6] strain restricts RNAi-mediated gene knockdown only to intestinal cells.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001196 egl-30 M01D7.7 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01D7.7a M01D7.7a 1068   I: 1835936-1836053
CDS:M01D7.7b M01D7.7b 912   I: 1838197-1838286
CDS:M01D7.7c M01D7.7c 339   I: 1840101-1840248

1 Laboratories

Primary Identifier
WE

1 Phenotype

Identifier Name Description
WBPhenotype:0001271 pathogen induced death increased Animals are more prone to lethality as a result of infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036653

1 Strain

WormBase ID
WBStrain00040175