WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086108 Genotype  trIs10; clr-1(e1745)
Phenotype Remark  Body-wall-muscle lateral ectopic membrane extensions (EMEs) induced by RNAi of epi-1 are strongly suppressed by the clr-1(e1745) loss-of-function mutation Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3a K08C7.3a 11115   IV: 10666833-10667028
CDS:K08C7.3c K08C7.3c 11052   IV: 10666833-10667028
CDS:K08C7.3f K08C7.3f 11148   IV: 10666833-10667028
CDS:K08C7.3b K08C7.3b 11019   IV: 10666833-10667028
CDS:K08C7.3d K08C7.3d 10992   IV: 10666833-10667028
CDS:K08C7.3e K08C7.3e 11088   IV: 10666833-10667028

1 Laboratories

Primary Identifier
RP

1 Phenotype

Identifier Name Description
WBPhenotype:0001932 myopodia present Animals exhibit ectopic plasma membrane extensions from muscle, these extensions are random projections that are thinner than the typical muscle arm.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027119

0 Strain