WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086319 Genotype  pshl-1::shl-1::W363F (Dominant negative SHL-1)
Phenotype Remark  RNAi of shk-1 in cultured myocytes (carrying a dominant negative form of SHL-1) resulted in the complete removal of all macroscopic outward (electircal) current. Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014261 shk-1 ZK1321.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1321.2a ZK1321.2a 1446   II: 9758254-9758378
CDS:ZK1321.2b ZK1321.2b 1575   II: 9758254-9758378
CDS:ZK1321.2d ZK1321.2d 1506   II: 9760879-9760898
CDS:ZK1321.2c ZK1321.2c 1611   II: 9758254-9758378
CDS:ZK1321.2e ZK1321.2e 1347   II: 9763355-9763380
CDS:ZK1321.2f ZK1321.2f 1308   II: 9765439-9765545

1 Laboratories

Primary Identifier
LY

1 Phenotype

Identifier Name Description
WBPhenotype:0001315 electrophysiology phenotype Animals exhibit variations in the electrical properties of any of its cells or tissues compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028359

0 Strain