WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102280 Remark  (Figure S3B) daf-2 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D5A.5c Y55D5A.5c 5787   III: 2995919-2996014
CDS:Y55D5A.5e Y55D5A.5e 5313   III: 2995919-2996014
CDS:Y55D5A.5a Y55D5A.5a 5541   III: 2995919-2996014
CDS:Y55D5A.5d Y55D5A.5d 5400   III: 2995919-2996014

1 Laboratories

Primary Identifier
IR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0002265 lysosome-related organelle biogenesis variant Variations in the processes that are carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of membrane bound organelles, known as lysosome-related organelles (LROs) that, like lysosomes, have an acidic interior and generally act to digest components of the cell but are distinct in function, composition, and morphology, compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041842

1 Strain

WormBase ID
WBStrain00000001