WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00081683 Genotype  G85R (mutant) SOD-YFP (human) transgene
Phenotype Remark  RNAi resulted in an enhanced aggregation of the (human derived) G85R (mutant) SOD-YFP transgene product
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006931 vps-26 T20D3.7 Caenorhabditis elegans
WBGene00011858 T20D3.5 T20D3.5 Caenorhabditis elegans
WBGene00011859 T20D3.6 T20D3.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D3.6a T20D3.6a 435   IV: 9338740-9338963
CDS:T20D3.6b T20D3.6b 333   IV: 9338740-9338963

1 Laboratories

Primary Identifier
IY

1 Phenotype

Identifier Name Description
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00034765

0 Strain