WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098810 Phenotype Remark  Defect in the anchoring of the nucleus to the cortex in E cells. Similar effects were also observed for the nuclear anchoring in ABalp and ABprp.
Remark  Exact sequence used for RNAi not stated but authors used cDNA clone yk117f2 (src-1).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005077 src-1 Y92H12A.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.1b Y92H12A.1b 1614   I: 1567609-1567685
CDS:Y92H12A.1a Y92H12A.1a 1602   I: 1567609-1567685
CDS:Y92H12A.1c Y92H12A.1c 1434   I: 1570440-1570681
CDS:Y92H12A.1d Y92H12A.1d 678   I: 1577400-1577868

1 Laboratories

Primary Identifier
HS

1 Phenotype

Identifier Name Description
WBPhenotype:0001997 nuclear anchoring variant The nucleus or nuclei are not positioned in a similar manner or pattern in the cell or syncytium to that observed in controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036055

0 Strain