WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084633 Remark  Authors report using a BamHI-PstI restriction fragment of the yk1438d03 clone; BamHI and PstI cut sites could not be found in this clone; yk1438d03 sequence used for curation
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B5.9j R07B5.9j 3750   V: 9846598-9847140
CDS:R07B5.9f R07B5.9f 4749   V: 9846598-9847131
CDS:R07B5.9b R07B5.9b 1707   V: 9850147-9850380
CDS:R07B5.9k R07B5.9k 1545   V: 9850316-9850387
CDS:R07B5.9a R07B5.9a 3741   V: 9846598-9847131
CDS:R07B5.9c R07B5.9c 4614   V: 9846598-9847131
CDS:R07B5.9d R07B5.9d 3762   V: 9846598-9847131
CDS:R07B5.9g R07B5.9g 4623   V: 9846598-9847140
CDS:R07B5.9h R07B5.9h 4758   V: 9846598-9847140
CDS:R07B5.9i R07B5.9i 3771   V: 9846598-9847140

1 Laboratories

Primary Identifier
HS

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001927 extra distal tip cells Animals produce an excess number of distal tip cells compared to controls.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036007

1 Strain

WormBase ID
WBStrain00000001